PUBLICATIONS

See Susan Bailey's full CV here.

See Susan Bailey's profile at Google Scholar.

​

Preprint in revision: Spatial structure affects evolutionary dynamics and drives genomic diversity in experimental populations of Pseudomonas fluorescens. Bailey, SF, A Trudeau, K Tulowiecki, M McGrath, A Belle, H Fountain, & M Akter. Available on bioRxiv: https://doi.org/10.1101/2021.09.28.461808

​

The evolution of SARS-CoV-2. In: Studies to Combat COVID-19 using Science and Engineering. 2022. Bailey, SF & M Akter. pp. 55–78. D. Barry & H. Kanematsu, eds. Springer Nature, Singapore.

​

Towards evolutionary predictions: current promises and challenges. 2022. Wortel, MT, D Agashe, SF Bailey, C Bank, K Bisschop, et al. Accepted at Evolutionary Applications. pre-print available on EcoEvoRxiv: https://ecoevorxiv.org/4u3mg/

Modeling optimal reopening strategies for COVID-19 and its variants by keeping infections low and fixing testing capacity. 2022. Dalton, M, P Dougall, F Laud,W Annan, E Asante-Asamani, SF Bailey, J Greene, D White. PLOS ONE. 17:e0274407. https://doi.org/10.1371/journal.pone.0274407
 

Effects of synonymous mutations beyond codon bias: The evidence for adaptive synonymous substitutions from microbial evolution experiments. 2021. Bailey, SF, LA Alonso Morales, R Kassen. Genome Biology and Evolution, 13:9, evab141. https://doi.org/10.1093/gbe/evab141

A constant introduction of additional food does not yield pest eradication in finite time. 2020. Parshad, R, S Wickramsooriya & SF Bailey. Theoretical Population Biology 132: 60-68. https://doi.org/10.1016/j.tpb.2019.11.010

​

The distribution of fitness effects among synonymous mutations in a gene under directional selection. 2019. E Lebeuf-Taylor, N McCloskey, SF Bailey, A Hinz, R Kassen. eLife. 8: e45952. DOI: 10.7554/eLife.45952

​

Identifying drivers of parallel evolution: A regression model approach. 2018. SF Bailey, Q Guo, T Bataillon. Genome Biology and Evolution. 10(10), 2801-2812. DOI: 10.1093/gbe/evy210

​

What drives parallel evolution? 2017. SF Bailey, F Blanquart, T Bataillon, R Kassen. BioEssays. 39(1):

1-9. DOI: 10.1002/bies.201600176

​

Can the experimental evolution programme help us elucidate the genetic basis of adaptation in nature?  2016. SF Bailey, T Bataillon. Molecular Ecology. 25(1): 203-218. DOI: 10.1111/mec.13378

Evolution of fitness trade-offs in locally adapted populations of Pseudomonas fluorescens.
2015. A Schick, SF Bailey, R Kassen. American Naturalist 186: S48-S59. DOI: 10.1086/682932

Fitness declines towards range limits and local adaptation to climate affect dispersal evolution during climate‐induced range shifts. 2015. AL Hargreaves, SF Bailey, RA Laird. Journal of Evolutionary Biology 28(8): 1489-1501. DOI: 10.1111/jeb.12669

The effect of selection environment on the probability of parallel evolution. 2015. SF Bailey, N Rodrigue, R Kassen. Molecular Biology and Evolution, msv033. DOI: 10.1093/molbev/msv033

Effects of new mutations on fitness: insights from models and data. 2014. T Bataillon, SF Bailey. Annals of the New York Academy of Sciences 1320(1): 76-92. DOI: 10.1111/nyas.12460

Adaptive synonymous mutations in an experimentally evolved Pseudomonas fluorescens population. 2014. SF Bailey, A Hinz, R Kassen. Nature Communications 5. DOI:10.1038/ncomms5076

​

Competition both drives and impedes diversification in a model adaptive radiation. 2013. SF Bailey, JR Dettman, PB Rainey, R Kassen. Proceedings of the Royal Society of London B: Biological Sciences 280(1766): 20131253. DOI: 10.1098/rspb.2013.1253

Spatial structure of ecological opportunity drives adaptation in a bacterium. 2012. SF Bailey, R Kassen. The American Naturalist 180(2): 270-283. DOI: 10.1086/666609

Evolutionary insight from whole‐genome sequencing of experimentally evolved microbes. 2012. JR Dettman, N Rodrigue, AH Melnyk, A Wong, SF Bailey, R Kassen. Molecular Ecology 21(9): 2058-2077. DOI: 10.1111/j.1365-294X.2012.05484.x

Extrinsically and intrinsically generated spatial patterns of algal abundance in an experimental stream. 2009. SF Bailey, E McCauley. Ecological Complexity 6(3): 328-336. DOI:10.1016/j.ecocom.2009.01.001

Empty flowers as a pollination-enhancement strategy. 2007. SF Bailey, AL Hargreaves, SD Hechtenthal, RA Laird, TM Latty, TG Reid,  AC Teucher, JR Tindall. Evolutionary Ecology Research 9(8): 1245-1262. (link)